稻瘟病菌中假定三羧酸循环相关蛋白的生物信息学分析
首发时间:2015-01-30
摘要:三羧酸循环是需氧生物体物质和能量的代谢枢纽,在生物体的各项生命活动中发挥重要的功能。但是,迄今未见对稻瘟病菌中的三羧酸(TCA)循环相关蛋白进行鉴定和开展功能研究。本研究从酿酒酵母的17个TCA循环相关蛋白中比对得到稻瘟病菌的18个假定的TCA循环相关蛋白;功能结构域和系统进化分析结果表明,稻瘟病菌与酿酒酵母中TCA循环关键酶相应同源蛋白含相同的功能结构域,与禾谷镰刀菌、粗糙脉孢菌及构巢曲霉的进化关系最相近;在同源比对的基础上,进一步绘制了稻瘟病菌中TCA循环的代谢网络图,为系统分析稻瘟病菌TCA循环的网络系统提供参考。基因表达数据库结果表明,稻瘟病菌TCA循环相关基因在菌丝和附着胞形成阶段的均有表达,但基因间表达量差异很大
关键词: 稻瘟病菌 三羧酸循环 生物信息学 柠檬酸合酶 异柠檬酸脱氢酶 α-酮戊二酸脱氢酶
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The Bioinformatics Analysis of Putative Tricarboxylic Acid Cycle-Related Proteins in Magnaporthe oryzae
Abstract:Tricarboxylic acid cycle is hub material and energy metabolism and plays an important function in the life activities of aerobic organisms. However, the TCA cycle-related proteins in the plant pathogenic fungi, Magnaporthe oryzae, have not yet been identified and studied for their functions. In this study, we identified 18 putative TCA cycle-related proteins in M.oryzae by using 17 Saccharomyces cerevisiae proteins through BLAST search. The corresponding homologous protein contains the same functional domains in S. cerevisiae and M.oryzae,, the key proteins of TCA cycle in M. oryzae have the closest evolutionary relationship with Fusarium graminearum, Neurospora crassa and Aspergillus nidulans.by phylogenetic analysis. Based on the above results the TCA cycle metabolic network is drawn providing reference for further system analysis of rice blast fungus TCA cycle. In addition, all genes in TCA cycle expressed between appressorium and hyphal different stages, but there is obvious difference among genes.
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稻瘟病菌中假定三羧酸循环相关蛋白的生物信息学分析
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